DVT-0460
Run Name
150 + 150
Lane 1 (R1 + R2)
150 + 150
Lane 2 (R1 + R2)
1,542,306,748
Polonies
94.6%
Q30
98.0%
Index Assignment
450.993
Assigned Yield (Gb)
9 + 9
Lane 1 (I1 + I2)
9 + 9
Lane 2 (I1 + I2)
0.07%
Unexpected Pairs
Index Percentiles
Percentile Sample I1 I2 Polonies % Polonies
5th CBPhiXB2 CACATGCTG AGACACTGT 3,594,518 0.2331
50th CBPhiXC3 GTACACGAT CTCGTACAG 3,935,843 0.2552
95th GAT-ULTRAQ-L006 AAGCCGGAC AATACCGGT 571,834,975 37.0766
All Indices
# Sample I1 I2 Polonies % Polonies
1 GAT-ULTRAQ-L006 AAGCCGGAC AATACCGGT 571,834,975 37.0766
2 GAT-ULTRAQ-L010 CACCAATGG CGCGAGACT 514,930,221 33.3870
3 GAT-ULTRAQ-L011 CGCACCGAA GAAGATGTT 409,547,555 26.5542
4 CBPhiXC3 GTACACGAT CTCGTACAG 3,935,843 0.2552
5 CBPhiXD4 TGTGCATCA TAGTCGATC 3,918,429 0.2541
6 CBPhiXA1 ACGTGTAGC GCTAGTGCA 3,638,784 0.2359
7 CBPhiXB2 CACATGCTG AGACACTGT 3,594,518 0.2331
Top Unassigned Sequences
# I1 I2 Polonies % Polonies
1 ACCAATGGA CGCGAGACT 893,837 0.0580
2 AGCCGGACA AATACCGGT 875,442 0.0568
3 AAGCCGGAC AATGACGGT 722,638 0.0469
4 CACCAATGG AACGAGACT 586,587 0.0380
5 CACAATGGA CGCGAGACT 486,881 0.0316
6 AAAGCCGGA AATACCGGT 364,384 0.0236
7 AAGCCGGAC AATGCCAGT 333,868 0.0216
8 AAGCCGGGA AATACCGGT 317,802 0.0206
9 CACCAAATG CGCGAGACT 301,360 0.0195
10 AAGCCGACA AATACCGGT 295,132 0.0191
11 CACCAAGGA CGCGAGACT 287,504 0.0186
12 GCACCGAAA GAAGATGTT 285,869 0.0185
13 CGCACCGAA GAGATGTTC 276,966 0.0180
14 CGCACGAAA GAAGATGTT 264,020 0.0171
15 CACCATGGA CGCGAGACT 252,524 0.0164
16 AAGCCGGAC AATAACAGT 214,315 0.0139
17 CGCACCGAA GAAGATTTC 203,717 0.0132
18 AAGCCGGAC AATACCGTC 198,355 0.0129
19 AAGCCCGGA AATACCGGT 187,123 0.0121
20 AAGCCGGAC AATCCCGGG 174,072 0.0113
21 CACCAATGG AGCAAGACT 159,756 0.0104
22 AAGCGGACA AATACCGGT 146,425 0.0095
23 CCAATGGAG CGCGAGACT 138,168 0.0090
24 CAATGGAGT CGCGAGACT 119,384 0.0077
25 AAGCCGGAC AATCCCGGC 115,951 0.0075
26 AAGGCCGGA AATACCGGT 101,986 0.0066
27 CACCAATGG GACGAGACT 80,695 0.0052
28 AAGCCGGAC CGCGAGACT 73,808 0.0048
29 CGCAACTAA GAAGATGTT 54,639 0.0035
30 AAGCCGGAC AATCCCGGA 41,872 0.0027
31 AAGCCGGAC AATGACAGT 39,676 0.0026
32 CCCAATGGA CGCGAGACT 29,481 0.0019
43.4
Mean Q
95.2%
Q30
85.2%
Q40
0
Reads eliminated
150.0
Mean read length
Paired-End
Trim type
16
Min read length