DVT-0332
Run Name
150 + 150
Lane 1 (R1 + R2)
150 + 150
Lane 2 (R1 + R2)
960,721,191
Polonies
93.2%
Q30
99.2%
Index Assignment
269.139
Assigned Yield (Gb)
9 + 9
Lane 1 (I1 + I2)
9 + 9
Lane 2 (I1 + I2)
0.02%
Unexpected Pairs
Index Percentiles
Percentile Sample I1 I2 Polonies % Polonies
5th 20241105-JM-L1112-5 GCTATTACT CGTTGAATT 34,555,195 3.5968
50th 20241105-JM-L1112-9 CTCGTTAGT TATGTGGCC 39,030,573 4.0626
95th 20241105-JM-L1112-22 TTGGCCAAC TTGTTGTTC 44,631,958 4.6457
All Indices
# Sample I1 I2 Polonies % Polonies
1 20241105-JM-L1112-1 TGTAGGCCA TCTAGCCTC 44,743,358 4.6573
2 20241105-JM-L1112-22 TTGGCCAAC TTGTTGTTC 44,631,958 4.6457
3 20241105-JM-L1112-24 CTCCGCTAT TCATGCTTG 43,830,434 4.5622
4 20241105-JM-L1112-8 CTATTAGAC CAATTGTGA 42,989,804 4.4747
5 20241105-JM-L1112-18 GTGCGGTTC TCTTGTGAT 42,055,782 4.3775
6 20241105-JM-L1112-17 ATTCTAGAG AATCATGCG 41,879,537 4.3592
7 20241105-JM-L1112-7 TGTCTGTAA AAGAGCGCC 41,363,592 4.3055
8 20241105-JM-L1112-10 AATTCGTCT ATTGTAACC 40,941,510 4.2615
9 20241105-JM-L1112-20 TCTTCGCAA TACATCAGA 40,927,216 4.2601
10 20241105-JM-L1112-11 CTTAATCGA TTCTATTGG 40,281,242 4.1928
11 20241105-JM-L1112-23 CACGCACAT CCAGGAGTC 40,018,842 4.1655
12 20241105-JM-L1112-13 ACAACCGAT TCAACTTAG 39,861,125 4.1491
13 20241105-JM-L1112-9 CTCGTTAGT TATGTGGCC 39,030,573 4.0626
14 20241105-JM-L1112-15 CAGAGCTCC CCACGAACG 38,758,761 4.0343
15 20241105-JM-L1112-6 TCCACTAGC ACGGCCAAC 38,649,508 4.0230
16 20241105-JM-L1112-12 TTCCTTGGC TAGGCCGTC 38,627,306 4.0207
17 20241105-JM-L1112-3 TACATATCG TCCAATACC 38,455,756 4.0028
18 20241105-JM-L1112-19 TACCGTTGA ATTGCGTAT 38,387,068 3.9957
19 20241105-JM-L1112-4 TATCAACGC GATTCACGG 38,058,425 3.9614
20 20241105-JM-L1112-2 ATTGCCATA ATATTGGTG 37,303,935 3.8829
21 20241105-JM-L1112-16 CCATCTTGC CCGACCACT 37,178,055 3.8698
22 20241105-JM-L1112-14 GGTCACTTG AGGCGACCT 35,943,263 3.7413
23 20241105-JM-L1112-5 GCTATTACT CGTTGAATT 34,555,195 3.5968
24 20241105-JM-L1112-21 GATAGATGT AAGGTGATT 34,117,273 3.5512
Top Unassigned Sequences
# I1 I2 Polonies % Polonies
1 TGGCCAACA TTGTTGTTC 44,170 0.0046
2 TCCTTGGCA TAGGCCGTC 35,430 0.0037
3 TCCGCTATA TCATGCTTG 35,382 0.0037
4 CATCTTGCA CCGACCACT 34,794 0.0036
5 TGCGGTTCA TCTTGTGAT 33,228 0.0035
6 ATTCGTCTA ATTGTAACC 33,001 0.0034
7 GTCACTTGA AGGCGACCT 32,192 0.0034
8 TATTAGACA CAATTGTGA 31,333 0.0033
9 CTTCGCAAA TACATCAGA 31,065 0.0032
10 TCGTTAGTA TATGTGGCC 29,596 0.0031
11 TTGCCATAA ATATTGGTG 29,385 0.0031
12 TTAATCGAA TTCTATTGG 29,310 0.0031
13 CCACTAGCA ACGGCCAAC 28,939 0.0030
14 TTCTAGAGA AATCATGCG 28,813 0.0030
15 AGAGCTCCA CCACGAACG 28,370 0.0030
16 CAACCGATA TCAACTTAG 27,574 0.0029
17 ACGCACATA CCAGGAGTC 26,634 0.0028
18 ATCAACGCA GATTCACGG 26,316 0.0027
19 ACCGTTGAA ATTGCGTAT 25,615 0.0027
20 CTATTACTA CGTTGAATT 25,201 0.0026
21 ATAGATGTA AAGGTGATT 24,642 0.0026
22 GTCTGTAAA AAGAGCGCC 24,334 0.0025
23 GTAGGCCAA TCTAGCCTC 24,266 0.0025
24 ACATATCGA TCCAATACC 24,071 0.0025
25 TTTCCTTGG TAGGCCGTC 17,709 0.0018
26 TTCCTTTGG TAGGCCGTC 14,581 0.0015
27 TTTGGCCAA TTGTTGTTC 14,453 0.0015
28 CTTTAATCG TTCTATTGG 10,992 0.0011
29 TTGGCCAAC TGTTGTTCC 9,137 0.0010
30 CTCGTTTAG TATGTGGCC 5,975 0.0006
43.6
Mean Q
95.6%
Q30
88.3%
Q40
27
Reads eliminated
141.4
Mean read length
Paired-End
Trim type
16
Min read length