MAXQ-0607
Run Name
150 + 150
Lane 1 (R1 + R2)
150 + 150
Lane 2 (R1 + R2)
838,017,232
Polonies
97.1%
Q30
99.0%
Index Assignment
248.304
Assigned Yield (Gb)
9 + 9
Lane 1 (I1 + I2)
9 + 9
Lane 2 (I1 + I2)
0.00%
Unexpected Pairs
Index Percentiles
Percentile Sample I1 I2 Polonies % Polonies
5th CBPhiXD4 TGTGCATCA TAGTCGATC 1,981,910 0.2365
50th CBPhiXC3 GTACACGAT CTCGTACAG 2,102,694 0.2509
95th GAT-ULTRAQ-L013 GTACTTCAA CAAGTGCAG 821,712,783 98.0544
All Indices
# Sample I1 I2 Polonies % Polonies
1 GAT-ULTRAQ-L013 GTACTTCAA CAAGTGCAG 821,712,783 98.0544
2 CBPhiXB2 CACATGCTG AGACACTGT 2,182,915 0.2605
3 CBPhiXC3 GTACACGAT CTCGTACAG 2,102,694 0.2509
4 CBPhiXA1 ACGTGTAGC GCTAGTGCA 2,068,716 0.2469
5 CBPhiXD4 TGTGCATCA TAGTCGATC 1,981,910 0.2365
Top Unassigned Sequences
# I1 I2 Polonies % Polonies
1 TACTTCAAA CAAGTGCAG 941,453 0.1123
2 GTACTTCAA AAGTGCAGC 736,723 0.0879
3 GTACTTCAA CAGTGCAGC 696,936 0.0832
4 GTACTTCAA CAAGTGAGC 546,126 0.0652
5 GTACTTCAA CAAAGTGCA 544,021 0.0649
6 GTACTTCAA CAAGTGCGC 333,457 0.0398
7 GTACTCAAA CAAGTGCAG 263,094 0.0314
8 GTACTTCAA CAAGTGGCA 248,373 0.0296
9 GGTACTTCA CAAGTGCAG 243,307 0.0290
10 GTACTTCAA CAAGTGCCA 196,172 0.0234
11 GTACTTTCA CAAGTGCAG 176,529 0.0211
12 GTACTTCAA CCAAGTGCA 156,929 0.0187
13 GTAACTTCA CAAGTGCAG 150,821 0.0180
14 GTACTTCAA CAAGGCAGC 147,322 0.0176
15 GTATTCAAA CAAGTGCAG 134,295 0.0160
16 GTACTTCAA CAATGCAGC 126,999 0.0152
17 GTACTTCAA TCAAGTGCA 126,942 0.0151
18 GTCTTCAAA CAAGTGCAG 114,653 0.0137
19 GTACTTCAA CAAGGTGCA 94,600 0.0113
20 GACTTCAAA CAAGTGCAG 92,546 0.0110
21 AGTACTTCA CAAGTGCAG 83,241 0.0099
22 GTTACTTCA CAAGTGCAG 83,225 0.0099
23 GTACCTTCA CAAGTGCAG 77,347 0.0092
24 GTACTTCAA CAAGTTGCA 75,199 0.0090
25 CGTACTTCA CAAGTGCAG 70,732 0.0084
26 TGTACTTCA CAAGTGCAG 64,808 0.0077
27 ACTTCAAAG CAAGTGCAG 62,206 0.0074
28 GTACTTCAA CAAAGTCCA 45,462 0.0054
29 GTACTTCAA CAAGTCAGC 32,304 0.0039
30 GTACTTCAA CAAGCGTGC 8,654 0.0010
31 GTACTTCAA CCAGTGCCG 8,636 0.0010
50.4
Mean Q
97.9%
Q30
94.0%
Q40
81.1%
Q50
0
Reads eliminated
149.9
Mean read length
Paired-End
Trim type
16
Min read length