DVT-0165
Run Name
150 + 150
Lane 1 (R1 + R2)
150 + 150
Lane 2 (R1 + R2)
1,047,056,081
Polonies
94.5%
Q30
97.4%
Index Assignment
304.063
Assigned Yield (Gb)
8 + 8
Lane 1 (I1 + I2)
8 + 8
Lane 2 (I1 + I2)
0.19%
Unexpected Pairs
Index Percentiles
Percentile Sample I1 I2 Polonies % Polonies
5th PhiX_CB4 TGTGTCGA TGTCTGAC 12,563,299 1.1999
50th JM-L825-HG002 TCCTTGGT GAATCGAC 56,167,728 5.3643
95th JM-L825-HG002 GTCATCTA TCCAACCA 79,062,573 7.5509
All Indices
# Sample I1 I2 Polonies % Polonies
1 JM-L824-HG001 TAAGCACA GACATTAA 82,333,829 7.8634
2 JM-L825-HG002 GTCATCTA TCCAACCA 79,062,573 7.5509
3 JM-L825-HG002 CGTTACCA GAACGCTA 70,149,515 6.6997
4 JM-L825-HG002 AGGTTATC ATCATACC 66,415,658 6.3431
5 JM-L825-HG002 CTGCGGAT GGTTATCT 62,613,511 5.9800
6 JM-L824-HG001 GCCGTCGA TTAATCAC 60,943,486 5.8205
7 JM-L825-HG002 TTACGCAC GACCATCT 60,805,466 5.8073
8 JM-L825-HG002 CCAGAGCT CGAACTTC 59,706,678 5.7023
9 JM-L825-HG002 TTATATCT GTCTGCAC 59,551,735 5.6875
10 JM-L824-HG001 ATTCCTCT GCGATATT 56,492,367 5.3954
11 JM-L825-HG002 TCCTTGGT GAATCGAC 56,167,728 5.3643
12 JM-L824-HG001 TGCTGCTG GTCCTCAT 55,254,070 5.2771
13 JM-L824-HG001 ATTATCAA CGACTCTC 52,936,533 5.0557
14 JM-L824-HG001 GCCTAGCC TTGGTCTG 50,726,098 4.8446
15 JM-L824-HG001 CGCCTTCC GCGGACTT 43,992,011 4.2015
16 JM-L824-HG001 TATCTGCC CCAACGCT 42,449,018 4.0541
17 PhiX_CB1 ATGTCGCT CTAGCTCG 16,480,854 1.5740
18 PhiX_CB2 CACAGATC ACGAGAGT 15,428,470 1.4735
19 PhiX_CB3 GCACATAG GACTACTA 15,359,912 1.4670
20 PhiX_CB4 TGTGTCGA TGTCTGAC 12,563,299 1.1999
Top Unassigned Sequences
# I1 I2 Polonies % Polonies
1 CTGCGATA GGTTATCT 212,697 0.0203
2 TCCTTGTA GAATCGAC 207,257 0.0198
3 GTCATCTA TCCAAACC 180,095 0.0172
4 GTATCTAA TCCAACCA 160,660 0.0153
5 AGGTTATC AATCATAC 140,723 0.0134
6 GTCATCTA TCCCAACC 133,829 0.0128
7 TAGCACAA GACATTAA 122,149 0.0117
8 TAAGACAA GACATTAA 120,198 0.0115
9 GCCGTGAA TTAATCAC 118,183 0.0113
10 TAAGCACA CGACATTA 116,282 0.0111
11 TCTTGGTA GAATCGAC 115,643 0.0110
12 CGTTACCA GAAACGCT 110,596 0.0106
13 GCGTCGAA TTAATCAC 109,713 0.0105
14 AGGTTATC ATCAATAC 109,327 0.0104
15 ATTCTCTA GCGATATT 108,772 0.0104
16 CTGGGATA GGTTATCT 108,266 0.0103
17 CAGAGCTA CGAACTTC 106,049 0.0101
18 AGTTATCA ATCATACC 103,126 0.0098
19 TATCTGCC CCAAACGC 98,200 0.0094
20 GTTACCAA GAACGCTA 97,233 0.0093
21 TTACGCAC GAACCATC 95,021 0.0091
22 GTCATTAA TCCAACCA 90,570 0.0086
23 TGCGGATA GGTTATCT 88,862 0.0085
24 GCCGTCGA TTAAATCA 79,448 0.0076
25 TTACGCAC GGACCATC 78,728 0.0075
26 TTACGACA GACCATCT 69,026 0.0066
27 TTCTGCCA CCAACGCT 55,864 0.0053
28 GCCGTCGA TTTAATCA 52,645 0.0050
29 ATTATCAA CCGACTCT 49,173 0.0047
30 TAAGCACA GAACATTA 24,247 0.0023
31 TATCTGCC CCCAACGC 22,055 0.0021
42.4
Mean Q
96.0%
Q30
86.8%
Q40
79
Reads eliminated
148.8
Mean read length
Paired-End
Trim type
16
Min read length